BACTERIAL DNA EXTRACTION WITH SLA-BASED MICROFLUIDIC PLATFORM


Çalımcı M., Tezcan T., Dirmencioğlu U., Yıldırım E., Tamer U.

BIOSENSORS 2025 35th Anniversary World Congress on Biosensors, Lisbon, Portekiz, 19 - 22 Mayıs 2025, ss.1, (Özet Bildiri)

  • Yayın Türü: Bildiri / Özet Bildiri
  • Basıldığı Şehir: Lisbon
  • Basıldığı Ülke: Portekiz
  • Sayfa Sayıları: ss.1
  • Gazi Üniversitesi Adresli: Evet

Özet

The monitoring of bacteria plays an important role in areas such as food and drinking water safety and the diagnosis of infectious diseases. Although bacteria can be detected by various methods, culture methods are generally used for accurate, reproducible, and selective bacterial identification. However, the culture method is time-consuming and requires trained personnel. One alternative to the culture method is PCR, but molecular detection methods like PCR require a DNA extraction step beforehand. During DNA extraction, DNA is concentrated and purified. We propose a DNA extraction platform by integrating magnetic beads with a microfluidic platform produced using Stereolithography (SLA), which requires minimal solution volume, and is easy and fast to use. To produce a 3D object with SLA, liquid polymers are cured under UV light. This technique does not require a clean room, mask-mold, or experienced personnel during production, making it cheaper compared to other methods. The SLA-produced microfluidic platform is designed with two inlets, a mixing channel, and a well. One inlet is used for bacterial entry, while the other is for DNA extraction solutions and magnetic beads. DNA released by the lysis of Staphylococcus aureus (S. aureus) mixed in the channel is collected in the well, and DNA held by magnetic beads is purified with washing solutions. The purified and concentrated DNA is then taken from the well and analyzed with qPCR. The qPCR results demonstrate successful DNA extraction from the SLA-produced microfluidic platform. This platform enables fast, easy DNA extraction from low sample volumes, using minimal solution amounts and without requiring centrifugation.