Revealing invisible chromosomal alterations involving pericentromeric regions of acrocentric chromosomes using specially designed FISH probes in patients with reproductive failure


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Bahap Y., Ergün M. A., Tuğ E., Liehr T., Yirmibeş Karaoğuz M.

European Human Genetics Conference, Berlin, Almanya, 1 - 04 Haziran 2024, ss.2383, (Tam Metin Bildiri)

  • Yayın Türü: Bildiri / Tam Metin Bildiri
  • Basıldığı Şehir: Berlin
  • Basıldığı Ülke: Almanya
  • Sayfa Sayıları: ss.2383
  • Gazi Üniversitesi Adresli: Evet

Özet

Background: Failure to achieve a healthy pregnancy or losing consecutive pregnancies is called a

reproductive problem, and affects approximately 15% of couples. Conventional cytogenetic techniques

are still crucial for uncovering microscopic chromosomal changes in these patients, but there is still

unclear territory for non-microscopic ones. This project aims to identify submicroscopic changes in the

pericentromeric regions of acrocentric chromosomes.

Methods: In this ongoing project, 20 couples with infertility or recurrent pregnancy loss (without

evidence of non-genetic factors or on routine genetic testing), were re-examined. Fluorescent in situ

hybridization (FISH) analysis was performed by means of newly designed probes that stain the

pericentromeric regions of acrocentric chromosomes (13-15, 21, and 22) and their alpha-satellite

regions. The brief abstract of the first results was presented at 15th National Congress of Medical

Genetics in May 2022.

Results: In two couples we found aberrant patterns with the applied FISH-probe sets. An invisible

reciprocal translocation emerged between Chr.15 and Chr.22. One couple never had a live birth, while

the other had a dysmorphic child due to adjacent-2 segregation resulting from translocation. Additional

FISH analysis of the affected child revealed three copies of the Histone Cell Cycle Regulator gene

located in the 22q11 region.

Conclusion: With this study, the detection of hidden microscopic changes in acrocentric chromosomes

investigates the causal cause of reproductive problems and also offers the opportunity for

preimplantation and/or prenatal genetic diagnosis.

Grants: The Scientific and Technological Research Council of Turkey (TÜBİTAK) supported this

project with no. 123S240 as 1002-Short-Term Support Module.