Publication Network
Education Information
2008 - 2014
2008 - 2014Doctorate
Middle East Technical University, Graduate School Of Natural And Applied Sciences, Mikro Ve Nanoteknoloji Anabilim Dalı (Disiplinlerarası), Turkey
2004 - 2008
2004 - 2008Postgraduate
Middle East Technical University, Graduate School Of Natural And Applied Sciences, Fizik (Yl) (Tezli), Turkey
1998 - 2004
1998 - 2004Undergraduate
Middle East Technical University, Faculty Of Arts And Sciences, Department Of Physics, Turkey
Dissertations
2014
2014Doctorate
Investigation of Structural Properties of Boron Carbide Nanosystems Under Mechanical and Thermal Effects: Molecular Dynamics Simulations
Middle East Technical University, Analiz ve Fonksiyonlar Teorisi, Mikro Ve Nanoteknoloji Anabilim Dalı (Disiplinlerarası)
2008
2008Postgraduate
Development of software for calculations of the reflectance, transmittance and absorptance of multilayered thin films
Middle East Technical University, Analiz ve Fonksiyonlar Teorisi, Fizik (Yl) (Tezli)
Foreign Languages
C1 Advanced
C1 AdvancedEnglish
Research Areas
Molecular Biophysics, Atomic and Molecular Interactions
Academic Titles / Tasks
2005 - Continues
2005 - ContinuesResearch Assistant PhD
Gazi University, Sağlık Hizmetleri Meslek Yüksekokulu, Tıbbi Hizmetler Ve Teknikleri Bölümü
Courses
Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes
2021
2021In silico identification of SARS-CoV-2 cell entry inhibitors from selected natural antivirals.
Şimşek Y. , Baran S. S. , Aslım B.
Journal of molecular graphics & modelling, vol.109, pp.108038, 2021 (Journal Indexed in SCI)
2018
2018Two-Photon Absorption Properties of Gold Fluorescent Protein: A Combined Molecular Dynamics and Quantum Chemistry Study
ŞİMŞEK Y. , Brown A.
JOURNAL OF PHYSICAL CHEMISTRY B, vol.122, no.22, pp.5738-5748, 2018 (Journal Indexed in SCI)
2015
2015Structural Properties of Monolayer Boron Carbide Nanoribbons Under Strain: Molecular Dynamics Simulations
Simsek Y. , Erkoc S.
JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, vol.12, no.9, pp.2180-2188, 2015 (Journal Indexed in SCI)
2012
2012A new model for chromotherapy application
BAŞBINAR AKTEKİN D. , ŞİMŞEK Y.
COLOR RESEARCH AND APPLICATION, vol.37, no.2, pp.154-156, 2012 (Journal Indexed in SCI)
Articles Published in Other Journals
2016
2016Structural Properties of Monolayer Boron Carbide Nanosheets Under Biaxial Strain Molecular Dynamics Simulations
ŞİMŞEK Y. , ERKOÇ Ş.
Quantum Matter, 2016 (Refereed Journals of Other Institutions)
2011
2011Renklerin duygular üzerine etkisi
Başbınar Aktekin D. , Şimşek Y. , Kaplan B.
Marmara tıp dergisi, vol.3, no.1, pp.31-33, 2011 (National Refreed University Journal)
Refereed Congress / Symposium Publications in Proceedings
2019
2019Two-Photon Absorption Properties of Gold Fluorescent Protein
ŞİMŞEK Y. , Brown A.
7th International BAU Drug Design Congress, 19 - 21 December 2019
2016
2016Molecular dynamic simulation of ZP3 protein in various solutions at different temperatures
ŞİMŞEK Y. , KOÇKAYA E. A.
Canadian Symposium on Theoretical and Computational Chemistry, 10 - 15 July 2016
2016
2016Molecular Dynamics Simulation of ZP3 Protein in Various Solutions at Different Temperatures
ŞİMŞEK Y. , KOÇKAYA E. A.
27. Canadian Symposium on Theoretical and Computational Chemistry, Regina, Canada, 10 - 15 July 2016
2015
2015Compression Applications to Cubic Like Boron Carbide Nanorods Molecular Dynamics Simulations
ŞİMŞEK Y. , NUR Y.
Innovative Technologies in Metallurgy and Materials Science Tiflis/Gürcistan, 16 - 18 July 2015
2015
2015Ceramic Production From Poly Silyne Co Hydridocarbyne
NUR Y., ŞİMŞEK Y.
Innovative Technologies in Metallurgy and Materials Science Tiflis/Gürcistan, 16 - 18 July 2015
2015
2015Molecular Dynamics Simulations of Different Boron Carbide Nanotubes
ŞİMŞEK Y. , NUR Y., ERKOÇ Ş.
11. Nanobilim ve Nanateknoloji Konferansı, Turkey, 22 - 25 June 2015
2015
2015Kübik Yapıdaki Bor Karbür Nano Çubuk Modelin Stres Altında Yapısal Değişimleri Moleküler Dinamik Benzeşim Teknikleri
ŞİMŞEK Y. , ERKOÇ Ş., NUR Y.
5. Fiziksel Kimya Kongresi, Turkey, 16 - 19 May 2015
2014
2014Molecular Dynamic Simulation of Boron Carbide Nanotubes
ŞİMŞEK Y. , ERKOÇ Ş.
10. Nanoscience and Nanotechnology Conference, 17 - 21 June 2014
2014
2014A Novel Approach for The Synthesis of Silicon Carbide Film
ŞİMŞEK Y. , NUR Y.
10. Nanoscience and Nanotechnology Conference, 17 - 21 June 2014
2016
2016Molecular Dynamics Simulation of Graphene Like Boron Carbide Nanosheet Under Biaxial Strain
NUR Y., ŞİMŞEK Y.
Bulletin of the Chemists and Technologists of Bosnia and Herzegovina Bosna Hersek, 1 - 03 January 2016
2013
2013Structural Properties of 2D Boron Carbide Sheets Under Biaxial Strain Molecular Dynamics Simulations
ŞİMŞEK Y. , ERKOÇ Ş.
Advanced Materials World Congress (AMWC 2013),Çeşme, 1 - 03 January 2013
2013
2013Synthesis of SiO2 Via Sintering Poly silyne co hydridocarbyne
NUR Y., ŞİMŞEK Y.
International Porous and Powder Materials Symposium and Exhibition, Çeşme, 1 - 03 January 2013
2013
2013Molecular Dynamics Simulation of Graphene Like Boron Carbide Nanoribbons Under Uniaxial Strain
ŞİMŞEK Y. , ERKOÇ Ş.
International Porous and Powder Materials Symposium and Exhibition, Çeşme, 1 - 03 January 2013
2013
2013Synthesis of Silicon Carbide Via Sintering Poly silyne co hydridocarbyne
NUR Y., ŞİMŞEK Y.
Advanced Materials World Congress (AMWC 2013), 1 - 03 January 2013
2010
2010Renk ve Duygu İlişkisi
Başbınar Aktekin D. , Şimşek Y. , Kaplan B.
9.ulusal sinirbilimleri kongresi, İstanbul, Turkey, 13 - 17 April 2010, pp.181
2009
2009Temel ses tonu iledepresyon ve anksiyete arasındaki ilişkisi
Başbınar Aktekin D. , Şimşek Y. , Kaplan B.
35.ulusal fizyoloji kongresi, Ankara, Turkey, 30 September - 03 October 2009, pp.7
Books & Book Chapters
2020
2020Boron Carbide Nanostructures: Structural, Mechanical and Thermal Properties
Şimşek Y. , Erkoç Ş.
in: Boron Carbide: Structure, Processing, Properties and Applications, Kolan Madhav Reddy, Editor, NOVA Science Publishers Inc. , New York, pp.77-103, 2020
Scientific Refereeing
June 2020
June 2020