Publications & Works

Publication Network
Articles 7
All (7)
SCI-E, SSCI, AHCI (5)
SCI-E, SSCI, AHCI, ESCI (5)
Scopus (5)
Other Publications (2)

1. In silico identification of sclerostin inhibitors

Şimşek Y., Baran S. S., Ergünol E., Uludamar A., Dinçel A., Erkoç Ş.
MOLECULAR DIVERSITY , vol.30, no.1, pp.1585-1598, 2026 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

2. In silico identification of SARS-CoV-2 cell entry inhibitors from selected natural antivirals.

Şimşek Y., Baran S. S., Aslım B.
Journal of molecular graphics & modelling , vol.109, pp.108038, 2021 (SCI-Expanded, Scopus) Sustainable Development identifier identifier identifier

3. Two-Photon Absorption Properties of Gold Fluorescent Protein: A Combined Molecular Dynamics and Quantum Chemistry Study

ŞİMŞEK Y., Brown A.
JOURNAL OF PHYSICAL CHEMISTRY B , vol.122, no.22, pp.5738-5748, 2018 (SCI-Expanded, Scopus) identifier identifier identifier

4. Structural Properties of Monolayer Boron Carbide Nanosheets Under Biaxial Strain Molecular Dynamics Simulations

ŞİMŞEK Y., ERKOÇ Ş.
Quantum Matter , 2016 (Peer-Reviewed Journal)

5. Structural Properties of Monolayer Boron Carbide Nanoribbons Under Strain: Molecular Dynamics Simulations

Simsek Y., Erkoc S.
JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE , vol.12, no.9, pp.2180-2188, 2015 (SCI-Expanded, Scopus) identifier identifier

6. A new model for chromotherapy application

BAŞBINAR AKTEKİN D., ŞİMŞEK Y.
COLOR RESEARCH AND APPLICATION , vol.37, no.2, pp.154-156, 2012 (SCI-Expanded, Scopus) identifier identifier

7. Renklerin duygular üzerine etkisi

Başbınar Aktekin D., Şimşek Y., Kaplan B.
Marmara tıp dergisi , vol.3, no.1, pp.31-33, 2011 (Peer-Reviewed Journal)
Papers Presented at Peer-Reviewed Scientific Conferences 19

1. Identification of Dickkopf-1/Kremen antagonist candidates using virtual screening

Baran S. S., Şimşek Y., Sepici Dinçel A.
TBS INTERNATIONAL BIOCHEMISTRY CONGRESS 2023 34th NATIONAL BIOCHEMISTRY CONGRESS, Muğla, Turkey, 29 October - 01 November 2023, pp.190-191, (Summary Text)

2. In Silico Identification of Sclerostin Inhibitors

Şimşek Y., Sepici Dinçel A., Sahra Setenay B., Ergünol E., Uludamar A., Erkoç Ş.
9th International BAU Drug Design Congress, İstanbul, Turkey, 29 November - 02 December 2023, (Summary Text)

3. Identification of Dickkopf-1 Antagonist Candidates Using Virtual Screening

Baran S. S., Şimşek Y., Sepici Dinçel A.
9th BAU Drug Design 2023, İstanbul, Turkey, 29 November - 02 December 2023, (Summary Text)

4. Two-Photon Absorption Properties of Gold Fluorescent Protein

ŞİMŞEK Y., Brown A.
7th International BAU Drug Design Congress, 19 - 21 December 2019, (Full Text)

5. Molecular dynamic simulation of ZP3 protein in various solutions at different temperatures

ŞİMŞEK Y., KOÇKAYA E. A.
Canadian Symposium on Theoretical and Computational Chemistry, 10 - 15 July 2016

6. Molecular Dynamics Simulation of ZP3 Protein in Various Solutions at Different Temperatures

ŞİMŞEK Y., KOÇKAYA E. A.
27. Canadian Symposium on Theoretical and Computational Chemistry, Regina, Canada, 10 - 15 July 2016, (Summary Text)

7. Compression Applications to Cubic Like Boron Carbide Nanorods Molecular Dynamics Simulations

ŞİMŞEK Y., NUR Y.
Innovative Technologies in Metallurgy and Materials Science Tiflis/Gürcistan, 16 - 18 July 2015, (Full Text)

8. Ceramic Production From Poly Silyne Co Hydridocarbyne

NUR Y., ŞİMŞEK Y.
Innovative Technologies in Metallurgy and Materials Science Tiflis/Gürcistan, 16 - 18 July 2015, (Full Text)

9. Molecular Dynamics Simulations of Different Boron Carbide Nanotubes

ŞİMŞEK Y., NUR Y., ERKOÇ Ş.
11. Nanobilim ve Nanateknoloji Konferansı, Turkey, 22 - 25 June 2015, (Full Text)

10. Kübik Yapıdaki Bor Karbür Nano Çubuk Modelin Stres Altında Yapısal Değişimleri Moleküler Dinamik Benzeşim Teknikleri

ŞİMŞEK Y., ERKOÇ Ş., NUR Y.
5. Fiziksel Kimya Kongresi, Turkey, 16 - 19 May 2015, (Summary Text)

11. Molecular Dynamic Simulation of Boron Carbide Nanotubes

ŞİMŞEK Y., ERKOÇ Ş.
10. Nanoscience and Nanotechnology Conference, 17 - 21 June 2014, (Summary Text)

12. A Novel Approach for The Synthesis of Silicon Carbide Film

ŞİMŞEK Y., NUR Y.
10. Nanoscience and Nanotechnology Conference, 17 - 21 June 2014, (Summary Text)

13. Molecular Dynamics Simulation of Graphene Like Boron Carbide Nanosheet Under Biaxial Strain

NUR Y., ŞİMŞEK Y.
Bulletin of the Chemists and Technologists of Bosnia and Herzegovina Bosna Hersek, 1 - 03 January 2016, (Summary Text)

14. Synthesis of Silicon Carbide Via Sintering Poly silyne co hydridocarbyne

NUR Y., ŞİMŞEK Y.
Advanced Materials World Congress (AMWC 2013), 1 - 03 January 2013, (Summary Text)

15. Structural Properties of 2D Boron Carbide Sheets Under Biaxial Strain Molecular Dynamics Simulations

ŞİMŞEK Y., ERKOÇ Ş.
Advanced Materials World Congress (AMWC 2013),Çeşme, 1 - 03 January 2013, (Summary Text)

16. Synthesis of SiO2 Via Sintering Poly silyne co hydridocarbyne

NUR Y., ŞİMŞEK Y.
International Porous and Powder Materials Symposium and Exhibition, Çeşme, 1 - 03 January 2013, (Summary Text)

17. Molecular Dynamics Simulation of Graphene Like Boron Carbide Nanoribbons Under Uniaxial Strain

ŞİMŞEK Y., ERKOÇ Ş.
International Porous and Powder Materials Symposium and Exhibition, Çeşme, 1 - 03 January 2013, (Summary Text)

18. Renk ve Duygu İlişkisi

Başbınar Aktekin D., Şimşek Y., Kaplan B.
9.ulusal sinirbilimleri kongresi, İstanbul, Turkey, 13 - 17 April 2010, pp.181, (Summary Text)

19. Temel ses tonu iledepresyon ve anksiyete arasındaki ilişkisi

Başbınar Aktekin D., Şimşek Y., Kaplan B.
35.ulusal fizyoloji kongresi, Ankara, Turkey, 30 September - 03 October 2009, pp.7, (Summary Text)
Books 2

1. II-VI Semiconductors Bandgap Engineering

KURBAN M., ŞİMŞEK Y., ERKOÇ Ş.
in: Handbook of II-VI Semiconductor-Based Sensors and Radiation Detectors, Ghenadii Korotcenkov, Editor, Springer Nature, pp.109-131, 2023

2. Boron Carbide Nanostructures: Structural, Mechanical and Thermal Properties

Şimşek Y., Erkoç Ş.
in: Boron Carbide: Structure, Processing, Properties and Applications, Kolan Madhav Reddy, Editor, NOVA Science Publishers Inc. , New York, pp.77-103, 2020
Metrics

Publication

29

Publication (WoS)

5

Publication (Scopus)

5

Citation (WoS)

16

H-Index (WoS)

2

Citation (Scopus)

24

H-Index (Scopus)

3

Project

3

Thesis Advisory

1

Open Access

1
UN Sustainable Development Goals